Your system is still 12VDC. W/ 4ea. batteries two are wired in series to a nominal 12V, then the 2 strings are connected in parallel, still 12V.
AGM Batteries can be charged at 20% of the C-20 Hour Rating.
When the voltage during Bulk Mode rises to 14.4 Volts and the Charger transitions from Bulk Mode to Absorb Mode then your AGM batteries are near 80% SOC, not 100% SOC. Absorb Mode charges the final 20% SOC ( 100% SOC when below < 1% Amps )
Bulk Mode for your AGM should be a much shorter time, at a much higher amps rate vs Flooded
Absorb Mode for your AGM is a much longer time, from (14.4v) 80% to 100% SOC vs the Flooded from (14.8v) 90% to 100% SOC.
Absorb Mode for an AGM is about twice as long, as Absorb Mode for a Flooded.
The Charging Profiles are similar, but they are not identical.
If you expect the Total Charging Time for AGM and Flooded to be the same then you must speed up Bulk Mode for your AGM,
because AGM Absorb Mode is much longer than Flooded.
You will want to
insure that the remote temperature probe is installed on the batteries. AGM's despite their being maintenance free, and resistant to spillage are easily damaged by excessive heat or over charging in hot conditions (>85F). The temp probe on the magnum Inverter throttles back the charging output in bulk, absorb modes. ) AGM 1 (for Lifeline AGM batteries)
Your generator run times will vary with DoD so for bulk the small generator may not have enough output.
Some would argue that 50% SoC might be approx. 12.2V
Even resting voltages are not very accurate, true wattage is a better measure of capacity for automation.
90% SoC could take anywhere from 2-6 hrs depending on ambient temp. (cooler shorter) in 100+ heat could take longer.
http://www.magnum-dimensions.com/sit...ev-D-ME-RC.pdf