I had to use some sealant on my the front of my Axis windshield as well. I didnt want to hassel with my local Camping World and it took care of the leak just fine.
I did remove the "Buttons" on my bulk head. They are plastic and pop on and off pretty easy. Use a flat blade screw driver and pop off. It will reveil a philips head screws. I took mine down and installed a ton of heat and sound insulation in it. It helped some not as dramatic as I hoped it would be.
Check to see if your clearance lights are leaking into this area.
You should be able to open it up and let it air dry for a few days if it is wet inside (I dont think mine would get wet unless its the clearance lights leaking - but its been a year or more since I opened it up).
Not sure if you would see any damage once dry. It might show water stains on the wood inside but once you close it up you wont see it.
Let us know what you find and how you fixed it so others can learn. 
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2017 Axis / 25.4: Big Foot Levelers, Aims 1200 Watt inverter, Ceramic Window Tint, Full River AGM 6V batteries, Front Hellwig Sway bar / Rear Track Arm, Safe T Plus Steering Stabilizer, PD 4655 converter, Hard Wired Surge Guard, WEboost + WiFi Ranger, LED Headlights/Driving lights, TPMS, Surge tank, Tornado flush, Viair Compressor
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